Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs11628343 | chr14:96052451 | A/G | 9.1E-7 | 214 | 9.77 | 23.1 | 14.83 | KM Plot |
| KIRP | rs11628821 | chr14:23717712 | A/G | 0.000359 | 204 | 14.53 | 17.62 | 17.13 | KM Plot |
| KIRP | rs116311701 | chr10:63496265 | T/C | 0 | 214 | 18.03 | 6.83 | 3.38 | KM Plot |
| KIRP | rs11640498 | chr16:74473049 | G/A | 0.000571 | 208 | 14.83 | 19.87 | 13.1 | KM Plot |
| KIRP | rs11641786 | chr16:19844865 | G/T | 3.67E-5 | 208 | 15.88 | 16.68 | 16.68 | KM Plot |
| KIRP | rs11642014 | chr16:19845423 | C/A | 3.76E-5 | 201 | 14.47 | 19.53 | 12.23 | KM Plot |
| KIRP | rs11642273 | chr16:651538 | G/A | 6.6E-5 | 213 | 16.53 | 14.87 | 6.57 | KM Plot |
| KIRP | rs11642339 | chr16:19832798 | G/T | 4.01E-5 | 206 | 15.88 | 16.68 | 16.68 | KM Plot |
| KIRP | rs116442826 | chr21:47604708 | T/G | 2.18E-8 | 211 | 16.47 | 14.87 | 1.9 | KM Plot |
| KIRP | rs11644668 | chr16:19847092 | A/T | 4.52E-5 | 207 | 15.2 | 16.43 | 16.68 | KM Plot |
| KIRP | rs11644759 | chr16:19847366 | A/G | 2.49E-6 | 205 | 14.47 | 19.5 | 12.23 | KM Plot |
| KIRP | rs11649005 | chr16:77155820 | A/G | 4.2E-7 | 214 | 17.12 | 12.03 | 25.4 | KM Plot |
| KIRP | rs116492196 | chr16:20440514 | C/T | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
| KIRP | rs116566545 | chr15:24649156 | T/G | 1.14E-6 | 206 | 15.33 | 20.82 | 9.77 | KM Plot |
| KIRP | rs116638437 | chr1:198107575 | T/C | 5.41E-7 | 213 | 14.68 | 33.13 | 13.65 | KM Plot |